Portifilio

My classwork from BIMM143 at UC San Diego

Index of Material

Introductory material

• Class 04 Intro to R
• Class 05 Data viz with ggplot
• Class 06 R functions
• Class 07 Machine learning for Bioinformatics
• Class 08 unsupervised learning mini-project
• Class 09 Candy PCA mini-project
• Class 10 Structural Bioinformatics
• Class 11 Structural Bioinformatics (pt2 AlphaFold)
• Class 12 Genome informatics and high throughput sequencing
• Class 13 Transcriptomics, RNA-Seq analysis, and the interpretation of gene lists
• Class 14 Project: RNA-Seq mini project
• Class 15 Hands-on with Git and GitHub
• Class 16 Essential UNIX for bioinformatics
• Class 17 Analyzing sequencing data in the cloud
• Class 18 Project: Investigating pertussis resurgence mini-project
• Class 19 Project: Cancer mutation analysis mini-project